Detailed information of Pocillopora_acuta_HIv2___RNAseq.g8878.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xfSc0000008:1682248...1699080
NR annotation: XP_027060200.1, large proline-rich protein bag6-A-like [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q9YHD3Large proline-rich protein bag6-A OS=Xenopus laevis OX=8355 GN=Bag6-a PE=2 SV=1
A4IH17Large proline-rich protein bag6 OS=Xenopus tropicalis OX=8364 GN=Bag6 PE=2 SV=1
A3KPW9Large proline-rich protein BAG6 OS=Danio rerio OX=7955 GN=Bag6 PE=3 SV=1
Gene familySubfamily
Ubiquitin FamilyULD|UBL|NEDD8
Ubiquitin FamilyULD|UFD/UBQ|UBQ_Other
Ubiquitin FamilyULD|UFD/UBQ|UBQ_PIM

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12057BAG6BCL2-associated athanogene 6DomainInterproscan
PF00240ubiquitinUbiquitin familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000626DomainUbiquitin-like domainInterproscan
IPR021925DomainLarge proline-rich protein BAG6Interproscan
IPR029071Homologous_superfamilyUbiquitin-like domain superfamilyInterproscan
IPR019954Conserved_siteUbiquitin conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15204LARGE PROLINE-RICH PROTEIN BAG6Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0030433Biological Processobsolete ubiquitin-dependent ERAD pathwayInterproscan
GO:0031593Molecular Functionpolyubiquitin modification-dependent protein bindingInterproscan
GO:0051787Molecular Functionmisfolded protein bindingInterproscan
GO:0071818Cellular ComponentBAT3 complexInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K23390BAG6; large proline-rich protein BAG6-DNA repair and recombination proteinsko03400deepkoala

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