Gene detail

Detailed information of Pocillopora_acuta_HIv2___RNAseq.g9023.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xfSc0000008:3616559...3617992
NR annotation: RMX37607.1, hypothetical protein pdam_00007890 [Pocillopora damicornis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
P50481	LIM/homeobox protein Lhx3 OS=Mus musculus OX=10090 GN=Lhx3 PE=1 SV=1
O97581	LIM/homeobox protein Lhx3 (Fragment) OS=Sus scrofa OX=9823 GN=LHX3 PE=2 SV=1
P53412	LIM/homeobox protein Lhx3 OS=Gallus gallus OX=9031 GN=LHX3 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00046	Homeodomain	Homeodomain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR017970	Conserved_site	Homeobox, conserved site	Interproscan
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR001356	Domain	Homeobox domain	Interproscan
IPR050453	Family	LIM/homeobox transcription factors	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24208	LIM/HOMEOBOX PROTEIN LHX	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0000977	Molecular Function	RNA polymerase II transcription regulatory region sequence-specific DNA binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0030182	Biological Process	neuron differentiation	Interproscan