Detailed information of Pocillopora_acuta_HIv2___RNAseq.g9175.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xfSc0000010:331297...340406
NR annotation: XP_027040710.1, histone H2A deubiquitinase MYSM1-like [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q5VVJ2Deubiquitinase MYSM1 OS=Homo sapiens OX=9606 GN=MYSM1 PE=1 SV=1
Q69Z66Deubiquitinase MYSM1 OS=Mus musculus OX=10090 GN=Mysm1 PE=1 SV=2
Q5F3F2Histone H2A deubiquitinase MYSM1 OS=Gallus gallus OX=9031 GN=MYSM1 PE=2 SV=1
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Jab_MPN

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00249Myb_DNA-bindingMyb-like DNA-binding domainDomainInterproscan
PF04433SWIRMSWIRM domainDomainInterproscan
PF01398JABJAB1/Mov34/MPN/PAD-1 ubiquitin proteaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR017930DomainMyb domainInterproscan
IPR050242FamilyJAMM/MPN+ metalloenzymes, peptidase M67AInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR001005DomainSANT/Myb domainInterproscan
IPR017884DomainSANT domainInterproscan
IPR007526DomainSWIRM domainInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR000555DomainJAB1/MPN/MOV34 metalloenzyme domainInterproscan
IPR037518DomainMPN domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10410EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008237Molecular Functionmetallopeptidase activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0008233Molecular Functionpeptidase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11865MYSM1; histone H2A deubiquitinaseEC:3.4.19.-
Ubiquitin systemko04121deepkoala

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