Detailed information of Pocillopora_acuta_HIv2___RNAseq.g9425.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xfSc0000010:4064335...4085750
NR annotation: CAH3132848.1, unnamed protein product [Pocillopora meandrina]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q92889DNA repair endonuclease XPF OS=Homo sapiens OX=9606 GN=ERCC4 PE=1 SV=3
Q9QYM7DNA repair endonuclease XPF OS=Cricetulus griseus OX=10029 GN=ERCC4 PE=2 SV=3
Q9QZD4DNA repair endonuclease XPF OS=Mus musculus OX=10090 GN=Ercc4 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02732ERCC4ERCC4 domainDomainInterproscan
PF05970PIF1PIF1-like helicaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR010994Homologous_superfamilyRuvA domain 2-likeInterproscan
IPR011335Homologous_superfamilyRestriction endonuclease type II-likeInterproscan
IPR047520DomainDNA repair endonuclease XPF, nuclease domainInterproscan
IPR006166DomainERCC4 domainInterproscan
IPR010285FamilyDNA helicase Pif1-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10150DNA REPAIR ENDONUCLEASE XPFInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0004518Molecular Functionnuclease activityInterproscan
GO:0000014Molecular Functionsingle-stranded DNA endodeoxyribonuclease activityInterproscan
GO:0000110Cellular Componentnucleotide-excision repair factor 1 complexInterproscan
GO:0000712Biological Processresolution of meiotic recombination intermediatesInterproscan
GO:0000724Biological Processdouble-strand break repair via homologous recombinationInterproscan
GO:0003684Molecular Functiondamaged DNA bindingInterproscan
GO:0003697Molecular Functionsingle-stranded DNA bindingInterproscan
GO:0006296Biological Processobsolete nucleotide-excision repair, DNA incision, 5'-to lesionInterproscan
GO:1901255Biological Processnucleotide-excision repair involved in interstrand cross-link repairInterproscan
GO:0000723Biological Processtelomere maintenanceInterproscan
GO:0003678Molecular FunctionDNA helicase activityInterproscan
GO:0006281Biological ProcessDNA repairInterproscan

TOP