Detailed information of Pocillopora_acuta_HIv2___RNAseq.g946.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xfSc0000002:6607239...6608498
NR annotation: XP_027038884.1, homeobox protein MSH-A-like [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q04743Homeobox protein EMX2 OS=Homo sapiens OX=9606 GN=EMX2 PE=1 SV=2
Q17R00Homeobox protein EMX2 OS=Bos taurus OX=9913 GN=EMX2 PE=2 SV=1
Q04744Homeobox protein EMX2 OS=Mus musculus OX=10090 GN=Emx2 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00046HomeodomainHomeodomainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR017970Conserved_siteHomeobox, conserved siteInterproscan
IPR001356DomainHomeobox domainInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR050674FamilyMsh Homeobox Transcriptional RegulatorsInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24338HOMEOBOX PROTEIN MSXInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0000977Molecular FunctionRNA polymerase II transcription regulatory region sequence-specific DNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0048598Biological Processembryonic morphogenesisInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K09341MSX; homeobox protein MSX-Transcription factorsko03000deepkoala

TOP