Detailed information of Pocillopora_acuta_HIv2___RNAseq.g9578.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xpSc0000395:353776...367050
NR annotation: XP_027043555.1, uncharacterized protein LOC113671533 [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001680RepeatWD40 repeatInterproscan
IPR003604DomainMatrin/U1-C-like, C2H2-type zinc fingerInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR042622FamilyZinc finger protein 106Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14435ZINC FINGER PROTEIN 106Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0017124Molecular FunctionSH3 domain bindingInterproscan

TOP