Gene detail

Detailed information of Pocillopora_acuta_HIv2___RNAseq.g9620.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xpSc0000395:806052...809706
NR annotation: XP_027043464.1, tenascin-R-like [Pocillopora damicornis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q7ZT75	Ficolin-1-A OS=Xenopus laevis OX=8355 GN=fcn1-a PE=1 SV=2
Q9WTS8	Ficolin-1 OS=Rattus norvegicus OX=10116 GN=Fcn1 PE=2 SV=2
P55083	Microfibril-associated glycoprotein 4 OS=Homo sapiens OX=9606 GN=MFAP4 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00812	Ephrin	Ephrin	Domain	Interproscan
PF00147	Fibrinogen_C	Fibrinogen beta and gamma chains, C-terminal globular domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR014716	Homologous_superfamily	Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1	Interproscan
IPR036056	Homologous_superfamily	Fibrinogen-like, C-terminal	Interproscan
IPR008972	Homologous_superfamily	Cupredoxin	Interproscan
IPR002181	Domain	Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain	Interproscan
IPR001799	Domain	Ephrin receptor-binding domain	Interproscan
IPR050373	Family	Fibrinogen C-terminal domain-containing protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19143	FIBRINOGEN/TENASCIN/ANGIOPOEITIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016020	Cellular Component	membrane	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K10104	FCN; ficolin	-	Lectins	ko04091	deepkoala