Genomic Location: Pocillopora_acuta_HIv2___Sc0000000:8473117...8485096
NR annotation: RMX55698.1, hypothetical protein pdam_00019088 [Pocillopora damicornis]
| CDS | |||||
| Pocillopora_acuta_HIv2___TS.g10889.t1 | |||||
| Transcript |
| Pocillopora_acuta_HIv2___TS.g10889.t1 |
| Protein |
| Pocillopora_acuta_HIv2___TS.g10889.t1 |
| Uniprot term | Description | ||||
|---|---|---|---|---|---|
| P49582 | Neuronal acetylcholine receptor subunit alpha-7 OS=Mus musculus OX=10090 GN=Chrna7 PE=1 SV=1 | ||||
| Q05941 | Neuronal acetylcholine receptor subunit alpha-7 OS=Rattus norvegicus OX=10116 GN=Chrna7 PE=1 SV=2 | ||||
| P22770 | Neuronal acetylcholine receptor subunit alpha-7 OS=Gallus gallus OX=9031 GN=CHRNA7 PE=1 SV=1 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | E3|E3 adaptor Cullin RING|BTB |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00651 | BTB | BTB/POZ domain | Domain | Interproscan |
| PF07707 | BACK | BTB And C-terminal Kelch | Domain | Interproscan |
| PF02932 | Neur_chan_memb | Neurotransmitter-gated ion-channel transmembrane region | Family | Interproscan |
| PF02931 | Neur_chan_LBD | Neurotransmitter-gated ion-channel ligand binding domain | Family | Interproscan |
| PF01344 | Kelch_1 | Kelch motif | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR011333 | Homologous_superfamily | SKP1/BTB/POZ domain superfamily | Interproscan |
| IPR006201 | Family | Neurotransmitter-gated ion-channel | Interproscan |
| IPR000210 | Domain | BTB/POZ domain | Interproscan |
| IPR011705 | Domain | BTB/Kelch-associated | Interproscan |
| IPR006029 | Domain | Neurotransmitter-gated ion-channel transmembrane domain | Interproscan |
| IPR038050 | Homologous_superfamily | Neuronal acetylcholine receptor | Interproscan |
| IPR036734 | Homologous_superfamily | Neurotransmitter-gated ion-channel ligand-binding domain superfamily | Interproscan |
| IPR006202 | Domain | Neurotransmitter-gated ion-channel ligand-binding domain | Interproscan |
| IPR015915 | Homologous_superfamily | Kelch-type beta propeller | Interproscan |
| IPR036719 | Homologous_superfamily | Neurotransmitter-gated ion-channel transmembrane domain superfamily | Interproscan |
| IPR006652 | Repeat | Kelch repeat type 1 | Interproscan |
| IPR018000 | Conserved_site | Neurotransmitter-gated ion-channel, conserved site | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR24412 | KELCH PROTEIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0004888 | Molecular Function | transmembrane signaling receptor activity | Interproscan |
| GO:0005216 | Molecular Function | monoatomic ion channel activity | Interproscan |
| GO:0016020 | Cellular Component | membrane | Interproscan |
| GO:0034220 | Biological Process | monoatomic ion transmembrane transport | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0006811 | Biological Process | monoatomic ion transport | Interproscan |
| GO:0005230 | Molecular Function | extracellular ligand-gated monoatomic ion channel activity | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K14951 | ATP13A3_4_5; cation-transporting P-type ATPase 13A3/4/5 | EC:7.2.2.- | Enzymes with EC numbers | - | deepkoala |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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