Detailed information of Pocillopora_acuta_HIv2___TS.g12087.t4a in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___Sc0000005:717226...725323
NR annotation: XP_027038747.1, alpha-actinin-like [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9QXQ0Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2
P57780Alpha-actinin-4 OS=Mus musculus OX=10090 GN=Actn4 PE=1 SV=1
A5D7D1Alpha-actinin-4 OS=Bos taurus OX=9913 GN=ACTN4 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08726EFhand_Ca_insenCa2+ insensitive EF handDomainInterproscan
PF00435SpectrinSpectrin repeatDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR014837DomainEF-hand, Ca insensitiveInterproscan
IPR018159RepeatSpectrin/alpha-actininInterproscan
IPR002048DomainEF-hand domainInterproscan
IPR011992Homologous_superfamilyEF-hand domain pairInterproscan
IPR002017RepeatSpectrin repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11915SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0030018Cellular ComponentZ discInterproscan
GO:0030036Biological Processactin cytoskeleton organizationInterproscan
GO:0030054Cellular Componentcell junctionInterproscan
GO:0030864Cellular Componentcortical actin cytoskeletonInterproscan
GO:0042995Cellular Componentcell projectionInterproscan
GO:0051015Molecular Functionactin filament bindingInterproscan
GO:0055001Biological Processmuscle cell developmentInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K05699ACTN1_4; actinin alpha 1/4-Exosomeko04147deepkoala

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