Genomic Location: Pocillopora_acuta_HIv2___xpSc0000390:726625...794184
NR annotation: RMX54109.1, hypothetical protein pdam_00014807, partial [Pocillopora damicornis]
| CDS | ||||
| Pocillopora_acuta_HIv2___TS.g1320.t3 | ||||
| Transcript |
| Pocillopora_acuta_HIv2___TS.g1320.t3 |
| Protein |
| Pocillopora_acuta_HIv2___TS.g1320.t3 |
| Uniprot term | Description |
|---|---|
| D3YXG0 | Hemicentin-1 OS=Mus musculus OX=10090 GN=Hmcn1 PE=1 SV=1 |
| A2VEC9 | SCO-spondin OS=Homo sapiens OX=9606 GN=SSPOP PE=2 SV=2 |
| Q700K0 | SCO-spondin OS=Rattus norvegicus OX=10116 GN=Sspo PE=2 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00090 | TSP_1 | Thrombospondin type 1 domain | Domain | Interproscan |
| PF13927 | Ig_3 | Immunoglobulin domain | Domain | Interproscan |
| PF01410 | COLFI | Fibrillar collagen C-terminal domain | Family | Interproscan |
| PF01391 | Collagen | Collagen triple helix repeat (20 copies) | Repeat | Interproscan |
| PF00092 | VWA | von Willebrand factor type A domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR036383 | Homologous_superfamily | Thrombospondin type-1 (TSP1) repeat superfamily | Interproscan |
| IPR000884 | Repeat | Thrombospondin type-1 (TSP1) repeat | Interproscan |
| IPR036465 | Homologous_superfamily | von Willebrand factor A-like domain superfamily | Interproscan |
| IPR013783 | Homologous_superfamily | Immunoglobulin-like fold | Interproscan |
| IPR003598 | Domain | Immunoglobulin subtype 2 | Interproscan |
| IPR000885 | Domain | Fibrillar collagen, C-terminal | Interproscan |
| IPR036179 | Homologous_superfamily | Immunoglobulin-like domain superfamily | Interproscan |
| IPR007110 | Domain | Immunoglobulin-like domain | Interproscan |
| IPR008197 | Domain | WAP-type 'four-disulfide core' domain | Interproscan |
| IPR002035 | Domain | von Willebrand factor, type A | Interproscan |
| IPR008160 | Repeat | Collagen triple helix repeat | Interproscan |
| IPR052065 | Family | Complement and asymmetry regulator | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR22906 | PROPERDIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005201 | Molecular Function | extracellular matrix structural constituent | Interproscan |
| GO:0005576 | Cellular Component | extracellular region | Interproscan |
| GO:0030414 | Molecular Function | peptidase inhibitor activity | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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