Gene detail

Detailed information of Pocillopora_acuta_HIv2___TS.g15620.t2 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___Sc0000004:5803347...5820188
NR annotation: XP_027056553.1, vacuolar protein sorting-associated protein 45-like [Pocillopora damicornis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
P97390	Vacuolar protein sorting-associated protein 45 OS=Mus musculus OX=10090 GN=Vps45 PE=1 SV=1
O08700	Vacuolar protein sorting-associated protein 45 OS=Rattus norvegicus OX=10116 GN=Vps45 PE=1 SV=1
Q9NRW7	Vacuolar protein sorting-associated protein 45 OS=Homo sapiens OX=9606 GN=VPS45 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00995	Sec1	Sec1 family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001619	Family	Sec1-like protein	Interproscan
IPR043127	Homologous_superfamily	Sec1-like, domain 3a	Interproscan
IPR027482	Homologous_superfamily	Sec1-like, domain 2	Interproscan
IPR043154	Homologous_superfamily	Sec1-like, domain 1	Interproscan
IPR036045	Homologous_superfamily	Sec1-like superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11679	VESICLE PROTEIN SORTING-ASSOCIATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016192	Biological Process	vesicle-mediated transport	Interproscan
GO:0000139	Cellular Component	Golgi membrane	Interproscan
GO:0006886	Biological Process	intracellular protein transport	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K12479	VPS45; vacuolar protein sorting-associated protein 45	-	Membrane trafficking	ko04131	deepkoala