Detailed information of Pocillopora_acuta_HIv2___TS.g16187.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___Sc0000036:774651...796948
NR annotation: CAH3044857.1, unnamed protein product [Pocillopora meandrina]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q7TN88Polycystin-1-like protein 2 OS=Mus musculus OX=10090 GN=Pkd1l2 PE=2 SV=1
H2LRU7Polycystin-2 OS=Oryzias latipes OX=8090 GN=pkd2 PE=1 SV=2
Q6IVV8Polycystin-2 OS=Danio rerio OX=7955 GN=pkd2 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01477PLATPLAT/LH2 domainDomainInterproscan
PF00041fn3Fibronectin type III domainDomainInterproscan
PF02010REJREJ domainFamilyInterproscan
PF20519Polycystin_domPolycystin domainDomainInterproscan
PF08016PKD_channelPolycystin cation channelFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000742DomainEGF-like domainInterproscan
IPR003961DomainFibronectin type IIIInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR051223FamilyPolycystinInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR001024DomainPLAT/LH2 domainInterproscan
IPR002859DomainPKD/REJ-like domainInterproscan
IPR036392Homologous_superfamilyPLAT/LH2 domain superfamilyInterproscan
IPR036116Homologous_superfamilyFibronectin type III superfamilyInterproscan
IPR046791DomainPolycystin domainInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR013122DomainPolycystin cation channel, PKD1/PKD2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10877POLYCYSTIN FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005262Molecular Functioncalcium channel activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0050982Biological Processdetection of mechanical stimulusInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan

TOP