Detailed information of Pocillopora_acuta_HIv2___TS.g16920.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___Sc0000019:2203237...2240224
NR annotation: CAH3034437.1, unnamed protein product [Pocillopora meandrina]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6DFB8Tetratricopeptide repeat protein 37 OS=Xenopus laevis OX=8355 GN=ttc37 PE=2 SV=1
F8VPK0Superkiller complex protein 3 OS=Mus musculus OX=10090 GN=Skic3 PE=3 SV=1
Q6PGP7Superkiller complex protein 3 OS=Homo sapiens OX=9606 GN=SKIC3 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13432TPR_16Tetratricopeptide repeatRepeatInterproscan
PF13181TPR_8Tetratricopeptide repeatRepeatInterproscan
PF13431TPR_17Tetratricopeptide repeatRepeatInterproscan
PF14559TPR_19Tetratricopeptide repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR019734RepeatTetratricopeptide repeatInterproscan
IPR039226FamilySki3/TTC37Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15704SUPERKILLER 3 PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0006401Biological ProcessRNA catabolic processInterproscan
GO:0034427Biological Processobsolete nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'Interproscan
GO:0055087Cellular ComponentSki complexInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K12600SKI3, TTC37; superkiller protein 3-Messenger RNA biogenesisko03019deepkoala

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