Gene detail

Detailed information of Pocillopora_acuta_HIv2___TS.g17587.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___Sc0000010:5705042...5710667
NR annotation: RMX51670.1, hypothetical protein pdam_00008130 [Pocillopora damicornis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Gene family

Uniprot term	Description
Q6ZNB5	Protein XNDC1N OS=Homo sapiens OX=9606 GN=XNDC1N PE=2 SV=2
Q9R283	Short transient receptor potential channel 2 OS=Rattus norvegicus OX=10116 GN=Trpc2 PE=2 SV=2
Q9R244	Short transient receptor potential channel 2 OS=Mus musculus OX=10090 GN=Trpc2 PE=2 SV=2

Gene family	Subfamily
Ubiquitin Family	UBD\|ZnF\|UBZ

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01834	XRCC1_N	XRCC1 N terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006642	Domain	Rad18, zinc finger UBZ4-type	Interproscan
IPR002706	Domain	DNA-repair protein Xrcc1, N-terminal	Interproscan
IPR008979	Homologous_superfamily	Galactose-binding-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11370	DNA-REPAIR PROTEIN XRCC1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0006281	Biological Process	DNA repair	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006284	Biological Process	base-excision repair	Interproscan
GO:0000012	Biological Process	single strand break repair	Interproscan
GO:0003684	Molecular Function	damaged DNA binding	Interproscan