Gene detail

Detailed information of Pocillopora_acuta_HIv2___TS.g18997.t1a in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___Sc0000031:332857...344666
NR annotation: CAH3116856.1, unnamed protein product [Pocillopora meandrina]

Gene Structure

More details in Jbrowse

Sequence

CDS

Pocillopora_acuta_HIv2___TS.g18997.t1a

ATGATTTTCGTGTTACAGGTCACAGCTCAGCTGCTGCTCCTCAGTGTCTCAACTGTGTTGGGATTTTCTAAAGGTCCTCCATTGAGTACCTGTGAGAGTAAGTTCCCTCACCACAAACATGCCCCGGCACAACAAGGACTGCCTCCCTATAACATCAATGTGTCCGCACTCTTGTACAGCCCTGGAGACAACCTGACAGTGACCATCTCAGGATCACAGCCTTTTACAGGATTCATTTTGAATGCACAGGGGACTGAAAGCTCAATTCCTTGGCCAGTAGGAACATTTACTCAAATTCCAAATTATACAGCTTATTTTTACTGTTCTGGAGGTAATCCAAAGAACACAGTTGGTCATAACAATCCTAAGCCAGCTAAGAATTTGAATTCACTTCAGTTCACTTGGATGGCTCCTGAAAAGAGCGCAGGGAACATCAGCTTCATCGCAACCATCGTTCAGAACTATTCCACTTTCTGGGAAAAAGTTACTTCACCTGTTGTTCACGGTCCGCCAGTGGAGAATGTCACTAGAGGGACTTCAACAGAGAGCTTTCAGATTGACAAAAAGGGATGTGGAGAGACCAAAGGGTGTTACTCCTTACCATCAAACTGCGCTGGAAGTGGAGACTGTACCTATCTTTTCACTTACAATGTTTCTGGAAGAAATGTTATCATAGACATGAGTGCTAAAGAGCGCTGGGTGGCAGTTGCTTTTAATGAAAATAAGCTAATGGATAAGATGGACTCCATAATGTGCACTACCATGGCAACTAATTTGGCAGAATTTCGTCATTTCTATTCTATTGGTCACAGTGTTGTCCGACAGGACCTGACTGGTAACTCTGACGTCACCTTTGACAAGATAGTTTATGAGGATGGTGGGATAAAGTGCAGGGTCACTCGTAAACTTACCTCAAATGCAGCCTACTTTAGAGATCTAACCAAGAAATGGTATCTGCTCTTCTCCTGGGGTAAAACAAGTTTGTCTGGCAGTGCACAGTATCACCGTGCCAATCAATCTGTCACAGCTGATATGGTGGACCTTGGTGTCAATGCAGTTCTTAAAGATGAAAAAAGTCAGGCTGAAGCTACAATAACCAAAGATGGGTGCAGGAAGACAAAGAGCTGCTATTCTGAGCCTGCACACTGCAAGTCTAGCAAAGACTGTGATTATCTTGTGACCATGAAACCCATGGGGGACCAGGGAGAGTCAGGCGAAGTGGAATTTGAGCTTAGCGCTAAGAAACAATGGGTGGCCATTGGTTTTAACAATGAAAAGAACAAGATGGATGGCACCGATGCCTTAATCTGCGCTGAAGTCAATGATAAAGTCACTGTAGAACATTATATGGCCGACCAAGGGTATGGTAGACCTACAAAGACCACCCCTACTCCCACTTCTATTATTGCAACTCTTGCTGAATCAAAAGGTGGAGTTGTTGCCTGTCGCTTTAAAAGGAAGAAGAAAGATGACAAGATGGTGGATCTTACAAAGGCATGGCATCTTGTGTATGCAAGTGGCCCTATGAGTGGAGACAAGATAGGCATACACTCCACAACTCCAAAAACCAGCCCTCAGAAAGTGGACGTCAGTGCAATCGGAGAGCTTGTTGCAGTAAAGGAGAGCATTACATTGGTAGAGGTTCATGGCTGTTTAATGGTTATTGCGTGGATCGGCTTTGCATCGATTGGAATGTTCATTGCTCGTCACATGAAGGTGTTGTTTGGCCAGAGGGTTCTGCTTGGTACCAAAATGTGGTTTACGCTTCACCGATTGTTAATGGTCTTGACAGTTGTGCTAACTATCCTTGGAGTTATCATCATCTTTGTTCATGCTGGTCGCTGGACCAAGGAAGCTGGTGCTCATCCAATCACTGGTATATTTGTACTGGTGCTTGCTGTTATTCAACCAATTATGGCAGTATTCAGACCCCACCCTGGAGAAGAAAAACGCTACATCTTCAACTGGGCTCATCGTGGTGTGGGGCTGTCTGCACTAATCCTGGCTGTGGTGACTGTGTTCTTTGGTCTTCGCCTTCCTGATTCAAGGCTAGGTGACTCCGCCCTGTACCCCATGGTCGCCTACTGTGTGGCTTTGACTCTTGTGGTTGCTTACGACATCTATGATACTTTGTCAACGCCACAGGGGGAAGCATTTTTCAGTGTCGTTCCATCGGGAGGGAAAGAAGCTGAAGATGTTGAATTGCAGCCCCCTGACATTCCGACTGTAAATGAACGCAAATTTCTGTTTGCCTTTACGGTTCTTGTTTCAGTTGGTGTTGTGATTGCACTTTTGGTGCTGATTGCAATCGCTGACAGGGAATCTCACGAACATGATCACAACAGCTAA

Transcript

Pocillopora_acuta_HIv2___TS.g18997.t1a

Protein

Uniprot

Uniprot term	Description
Q6ZNA5	Ferric-chelate reductase 1 OS=Homo sapiens OX=9606 GN=FRRS1 PE=1 SV=2
Q6INU7	Putative ferric-chelate reductase 1 OS=Xenopus laevis OX=8355 GN=frrs1 PE=2 SV=1
Q8K385	Ferric-chelate reductase 1 OS=Mus musculus OX=10090 GN=FRRS1 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02014	Reeler	Reeler domain	Family	Interproscan
PF03351	DOMON	DOMON domain	Domain	Interproscan
PF03188	Cytochrom_B561	Eukaryotic cytochrome b561	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002861	Domain	Reeler domain	Interproscan
IPR006593	Domain	Cytochrome b561/ferric reductase transmembrane	Interproscan
IPR042307	Homologous_superfamily	Reeler domain superfamily	Interproscan
IPR005018	Domain	DOMON domain	Interproscan
IPR051237	Family	Ferric-chelate Reductase and Defense	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45828	CYTOCHROME B561/FERRIC REDUCTASE TRANSMEMBRANE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016021	Cellular Component	membrane	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K04615	GABBR; gamma-aminobutyric acid type B receptor	-	G protein-coupled receptors	ko04030	deepkoala