Detailed information of Pocillopora_acuta_HIv2___TS.g20912.t1a in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xfSc0000013:3591021...3615436
NR annotation: CAH3120661.1, unnamed protein product [Pocillopora meandrina]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q921C3Bromodomain and WD repeat-containing protein 1 OS=Mus musculus OX=10090 GN=Brwd1 PE=1 SV=2
Q8WWQ0PH-interacting protein OS=Homo sapiens OX=9606 GN=PHIP PE=1 SV=2
Q9NSI6Bromodomain and WD repeat-containing protein 1 OS=Homo sapiens OX=9606 GN=BRWD1 PE=1 SV=4
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF00439BromodomainBromodomainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036427Homologous_superfamilyBromodomain-like superfamilyInterproscan
IPR018359Conserved_siteBromodomain, conserved siteInterproscan
IPR001487DomainBromodomainInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR052060FamilyBromodomain and WD repeat-containingInterproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR16266WD REPEAT DOMAIN 9Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0007010Biological Processcytoskeleton organizationInterproscan
GO:0008360Biological Processregulation of cell shapeInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11798BRWD1_3; bromodomain and WD repeat domain containing protein 1/3-Ubiquitin systemko04121deepkoala

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