Gene detail

Detailed information of Pocillopora_acuta_HIv2___TS.g20945.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xfSc0000013:4093051...4104830
NR annotation: XP_027060562.1, translocation protein SEC63 homolog [Pocillopora damicornis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Pocillopora_acuta_HIv2___TS.g20945.t1

ATGGCGGGAGCTCAATTCGAGTACGATGAAAAAGGCACAACTTTTTATTACTTTCTTTTATCGTTCTTTGGTATAGTGCTTGCGCCCCTAACATATTATGTATGGAAGGTCACAAAATTGCCAGAGGATCAGAAGGAAACAGTTAAAATCTGTAGATGTCCACCATGTGTAGAGAAACGGGAATTGTTGCGGAAAAAGGAGCCGAAATCGAAGAGTATTCGCTATGTGAGTCTTTCAGCTATAGCAGTTTTATGGGCTTTGTTCTTTATTGGAGCATATAAAGTGTCTCAATTTGAAAGAGAATTTGCTGAATATGATCCTTATGCTGTCTTAGAGTTGGACAGAGGTGCAAGCACGGCAGATATACGTCGACAGTATCGCAGACTCAGCATGAAATTCCATCCTGATAAGGACACTGGTGATTCCCAAAAGTTCATGAGGATAGCAAAAGCATATGAAGCGTTAACTAATGAAGAATCACGAAAAAATTGGGAGGAACATGGCAACCCTGATGGACCTGGGGCAACAAGCTTTGGAATAGCCTTACCTTCCTGGCTTGTTAGCAAGGAAAATTCCATGTGGGTTTTGGGAGCTTATGGACTTGCCTTCATGGTGATCCTTCCAATTGCAGTGGGGACATGGTGGTACAAGTCAATCCAGTATAGCTGTGAACAAATCCTTTTGAATACCACTCAGCTGTACATCCACTTTTTTCTCAAGACACCAGCCATGCAATCTAAACGTGTGTTAATGATTTTGGCTGGGTCCTTGGAGTTTGAAAAAGGTCACAATAATGAAGTTCAGGGGAGGCCTAGTGATAATTCAGAGCTACCAGAGCTCATGCGAGACTTGCCGAATCTGGGGGACAAGAACAAAGAGGCACCACTTTGTTACCCTTACAGCATCAAGGCAAGAGCTCTGATCCATGCTCACTTATCACGCCTAGAGCTTCCACGGCTCACGCTCAAATCAGATCTTGACTTAATACTTCAAAAGAGTCCATTCCTCATTCAAGAAATGGTGAGTTGTGTGTCACAGCTGGTTGGCATGGCCAAAGAAGGAAGAGTTCCAAACACACCACGGGTGGAGACAGTGGAGAATTGCATGCGTGTCAGTCAAATGATAATTCAGGGGCTGTGGGACACCAAGTCTCCCTTGTTACAACTGCCTCATCTCAGTCAGGAAAATTTGCGACACTTCACCACCAAAAAGCGAAGTGTTCGTTCCATCAAGCAGCTGGCAAGTATGAAAGATGAGGACAGAAGGGCTCTTTTGCGAAACCTAACTGGGGAACAGTATGAAGATGTCATTAATGTTTGTTCAATGTTTCCGTATGTGGAGATGGAGGTTAAACCTCATGTCTTGGATGATGCAGATGATGCAGGACTGATCACAACAGGCGCAATAGTGACTGTGGCTGTTATAATAAAAAGACGAAACCTTGGGGAGCTATTCGAGAAGGAAAACGAAGGTGATGTCCCACTACTAAATGGCGTGAATCCAAGTGAAACTTTAGAACCAAAGGGCTCACCACAACCTGGTGGTCACAAAGTATGGCAGAAAAACAAAAAGAAAGGGAAAAAGGCCAAACCACAAAAAAAGCAACCCAAGAAAAAACCCGTGAAACAACAGCCTAAAAAGAAAAACTCACAGGATGAGAAAGAGGATCAGAAAACTATAGAAGAAAAAGAAGAATCAAATGAAAAGAAGAACAAGAACAAGAACAAGAAAGAAGAAGAGAGGGAGGAAGAGGAGGAGGAGGATGAGGACGTGGAAGCGGAGAAGGAAGAAGTGGACGTGGAAGCGGAGAAGGAAGAAGTGGACGTGGAAGCGGAGAAGGAAGAAGTGGACGACGAGGAAGATAATGATGAAACTGATGATGATACTACGCACGAGAAAATTGAAGAAATTAAGAAAGGAAGAAGAAAACCTGATGAGCAGGAATCTGACTTGGATAGCAGCAGTTCTGGTGAAGATGATGACAGCTACGCTCCACATGATGTTAGCGCTCGGGATTCTGAAGATGAAGCCGAGTGGGACCGACTGCAAGCCGAAGTTAGGACTCGAGATGCAATTCTGGATCCGAAGTCAAAAGAAAGCCATATCGTCCATGCGCCTTATTTTCCAGAGGAAAAGCATGAATGGTGGTGGATATATGTCACAGATCGCAGAAGAAGAGAGCTAATAACACGGCCTCAAATGATATGCAACCTTAAAGACGAAGAAAAGCTGGATCTGAAGTTTCAAGCACCGTACAAAGCCAAAACGTACCATTACACTGTCACTCTACGATCAGACTCTTACTTGGACTTGGACGTTCATCAAAATTTTTACATTAATGTGGAAGAAGCTAAAGAAGTTGATACCAAACAATGGGATCCTGATTCAGATGAAGAAGACAAAGACGACTTGGACGAGAGCGGAGAGAGTGAAGAGGAGGAATACAGTGACTGA

Transcript

Pocillopora_acuta_HIv2___TS.g20945.t1

Protein

Uniprot

Uniprot term	Description
Q8VHE0	Translocation protein SEC63 homolog OS=Mus musculus OX=10090 GN=Sec63 PE=1 SV=4
Q9UGP8	Translocation protein SEC63 homolog OS=Homo sapiens OX=9606 GN=SEC63 PE=1 SV=2
Q5R660	Translocation protein SEC63 homolog OS=Pongo abelii OX=9601 GN=SEC63 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02889	Sec63	Sec63 Brl domain	Family	Interproscan
PF00226	DnaJ	DnaJ domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001623	Domain	DnaJ domain	Interproscan
IPR036869	Homologous_superfamily	Chaperone J-domain superfamily	Interproscan
IPR014756	Homologous_superfamily	Immunoglobulin E-set	Interproscan
IPR004179	Domain	Sec63 domain	Interproscan
IPR035892	Homologous_superfamily	C2 domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24075	SEC63 DOMAIN-CONTAINING	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0006614	Biological Process	SRP-dependent cotranslational protein targeting to membrane	Interproscan
GO:0006620	Biological Process	post-translational protein targeting to endoplasmic reticulum membrane	Interproscan
GO:0008320	Molecular Function	protein transmembrane transporter activity	Interproscan
GO:0031207	Cellular Component	Sec62/Sec63 complex	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K09540	SEC63, DNAJC23; translocation protein SEC63	-	Secretion system	ko02044	deepkoala