Detailed information of Pocillopora_acuta_HIv2___TS.g22577.t1b in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xfSc0000029:1068890...1097137
NR annotation: CAH3111328.1, unnamed protein product [Pocillopora meandrina]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O88307Sortilin-related receptor OS=Mus musculus OX=10090 GN=Sorl1 PE=1 SV=3
P0DSP1Sortilin-related receptor OS=Rattus norvegicus OX=10116 GN=Sorl1 PE=1 SV=1
Q95209Sortilin-related receptor OS=Oryctolagus cuniculus OX=9986 GN=SORL1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00041fn3Fibronectin type III domainDomainInterproscan
PF15902Sortilin-Vps10Sortilin, neurotensin receptor 3,RepeatInterproscan
PF00801PKDPKD domainDomainInterproscan
PF15901Sortilin_CSortilin, neurotensin receptor 3, C-terminalDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003961DomainFibronectin type IIIInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR022409DomainPKD/Chitinase domainInterproscan
IPR000601DomainPKD domainInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR031778DomainSortilin, N-terminalInterproscan
IPR035986Homologous_superfamilyPKD domain superfamilyInterproscan
IPR036116Homologous_superfamilyFibronectin type III superfamilyInterproscan
IPR031777DomainSortilin, C-terminalInterproscan
IPR006581DomainVPS10Interproscan
IPR050310FamilyVPS10-related sortilin family receptorsInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12106SORTILIN RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005794Cellular ComponentGolgi apparatusInterproscan
GO:0006892Biological Processpost-Golgi vesicle-mediated transportInterproscan
GO:0016021Cellular ComponentmembraneInterproscan

TOP