Detailed information of Pocillopora_acuta_HIv2___TS.g24593.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xfSc0000000:7396302...7425837
NR annotation: XP_027044462.1, E3 ubiquitin-protein ligase TRIP12-like isoform X2 [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
B4F6W9E3 ubiquitin-protein ligase TRIP12 OS=Xenopus tropicalis OX=8364 GN=trip12 PE=2 SV=1
F1LP64E3 ubiquitin-protein ligase TRIP12 OS=Rattus norvegicus OX=10116 GN=Trip12 PE=1 SV=1
G5E870E3 ubiquitin-protein ligase TRIP12 OS=Mus musculus OX=10090 GN=Trip12 PE=1 SV=1
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity|HECT

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00632HECTHECT-domain (ubiquitin-transferase)DomainInterproscan
PF02825WWEWWE domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR000569DomainHECT domainInterproscan
IPR018123DomainWWE domain, subgroupInterproscan
IPR035983Homologous_superfamilyHECT, E3 ligase catalytic domainInterproscan
IPR011989Homologous_superfamilyArmadillo-like helicalInterproscan
IPR004170DomainWWE domainInterproscan
IPR045322FamilyE3 ubiquitin-protein ligase HECTD1/TRIP12-likeInterproscan
IPR037197Homologous_superfamilyWWE domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45670E3 UBIQUITIN-PROTEIN LIGASE TRIP12Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0000209Biological Processprotein polyubiquitinationInterproscan
GO:0006511Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0016607Cellular Componentnuclear speckInterproscan
GO:0043161Biological Processproteasome-mediated ubiquitin-dependent protein catabolic processInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10590TRIP12; E3 ubiquitin-protein ligase TRIP12EC:2.3.2.26
Ubiquitin systemko04121deepkoala

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