Detailed information of Pocillopora_acuta_HIv2___TS.g24811.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xfSc0000000:11548603...11557597
NR annotation: CAH3161318.1, unnamed protein product, partial [Pocillopora meandrina]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q13449Limbic system-associated membrane protein OS=Homo sapiens OX=9606 GN=LSAMP PE=1 SV=2
Q62813Limbic system-associated membrane protein OS=Rattus norvegicus OX=10116 GN=Lsamp PE=1 SV=1
Q98919Limbic system-associated membrane protein OS=Gallus gallus OX=9031 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13927Ig_3Immunoglobulin domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050958FamilyCell Adhesion and Cytoskeletal OrganizationInterproscan
IPR007110DomainImmunoglobulin-like domainInterproscan
IPR003598DomainImmunoglobulin subtype 2Interproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR000082DomainSEA domainInterproscan
IPR003599DomainImmunoglobulin subtypeInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45080CONTACTIN 5Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007156Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan
GO:0008046Molecular Functionaxon guidance receptor activityInterproscan
GO:0030424Cellular ComponentaxonInterproscan
GO:0043025Cellular Componentneuronal cell bodyInterproscan
GO:0050808Biological Processsynapse organizationInterproscan

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