Gene detail

Detailed information of Pocillopora_acuta_HIv2___TS.g25076.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xfSc0000026:699747...703837
NR annotation: XP_027048273.1, homeobox protein Hox-C6-like [Pocillopora damicornis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
P50901	Homeobox protein HOX3 OS=Branchiostoma floridae OX=7739 PE=2 SV=1
Q8AWZ2	Homeobox protein Hox-A3a OS=Danio rerio OX=7955 GN=hoxa3a PE=2 SV=1
O42368	Homeobox protein Hox-B3a OS=Danio rerio OX=7955 GN=hoxb3a PE=2 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00046	Homeodomain	Homeodomain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000047	Conserved_site	Helix-turn-helix motif	Interproscan
IPR017970	Conserved_site	Homeobox, conserved site	Interproscan
IPR001356	Domain	Homeobox domain	Interproscan
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR020479	Domain	Homeobox domain, metazoa	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45664	PROTEIN ZERKNUELLT 1-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan