Detailed information of Pocillopora_acuta_HIv2___TS.g26100.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xfSc0000007:2405991...2441079
NR annotation: XP_022787696.1, otoferlin-like [Stylophora pistillata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5SPC5Otoferlin OS=Danio rerio OX=7955 GN=otof PE=3 SV=1
Q9HC10Otoferlin OS=Homo sapiens OX=9606 GN=OTOF PE=1 SV=3
Q9ERC5Otoferlin OS=Rattus norvegicus OX=10116 GN=Otof PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00168C2C2 domainDomainInterproscan
PF08150FerBFerB (NUC096) domainDomainInterproscan
PF16165Ferlin_CFerlin C-terminusFamilyInterproscan
PF08151FerIFerI (NUC094) domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR035892Homologous_superfamilyC2 domain superfamilyInterproscan
IPR000008DomainC2 domainInterproscan
IPR012968DomainFerIin domainInterproscan
IPR012561DomainFerlin B-domainInterproscan
IPR032362DomainFerlin, C-terminal domainInterproscan
IPR037723DomainFerlin, fourth C2 domainInterproscan
IPR037721FamilyFerlin familyInterproscan
IPR037722DomainFerlin, third C2 domainInterproscan
IPR037720DomainFerlin, second C2 domainInterproscan
IPR037726DomainFerlin, first C2 domainInterproscan
IPR037724DomainFerlin, fifth C2 domainInterproscan
IPR037725DomainFerlin, sixth C2 domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12546FER-1-LIKEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016020Cellular ComponentmembraneInterproscan
GO:0007009Biological Processplasma membrane organizationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K19949OTOF; otoferlin-Membrane traffickingko04131deepkoala

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