Detailed information of Pocillopora_acuta_HIv2___TS.g28603.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___Sc0000001:3242981...3268460
NR annotation: CAH3123210.1, unnamed protein product [Pocillopora meandrina]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9D071MMS19 nucleotide excision repair protein homolog OS=Mus musculus OX=10090 GN=Mms19 PE=1 SV=1
E1BP36MMS19 nucleotide excision repair protein homolog OS=Bos taurus OX=9913 GN=MMS19 PE=2 SV=3
Q6DCF2MMS19 nucleotide excision repair protein homolog OS=Xenopus laevis OX=8355 GN=mms19 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14500MMS19_NDos2-interacting transcription regulator of RNA-Pol-IIDomainInterproscan
PF12460MMS19_CRNAPII transcription regulator C-terminalRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR039920FamilyDNA repair/transcription protein MET18/MMS19Interproscan
IPR011989Homologous_superfamilyArmadillo-like helicalInterproscan
IPR029240DomainMMS19, N-terminalInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR024687DomainMMS19, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12891DNA REPAIR/TRANSCRIPTION PROTEIN MET18/MMS19Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016226Biological Processiron-sulfur cluster assemblyInterproscan
GO:0097361Cellular Componentcytosolic [4Fe-4S] assembly targeting complexInterproscan
GO:0097428Biological Processprotein maturation by iron-sulfur cluster transferInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K15075MET18, MMS19; DNA repair/transcription protein MET18/MMS19-DNA repair and recombination proteinsko03400deepkoala

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