Detailed information of Pocillopora_acuta_HIv2___TS.g29372.t2 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___Sc0000001:11940867...11946238
NR annotation: CAH3147986.1, unnamed protein product [Pocillopora meandrina]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A0A0B5RUB0Trimethylamine transporter OS=Myroides profundi OX=480520 GN=tmaT PE=1 SV=1
Q6F754Glycine betaine transporter OS=Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1) OX=62977 GN=ACIAD3460 PE=1 SV=1
P9WPR6Uncharacterized transporter MT0942 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=MT0942 PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04749PLAC8PLAC8 familyFamilyInterproscan
PF02028BCCTBCCT, betaine/carnitine/choline family transporterFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006461FamilyPLAC8 motif-containing proteinInterproscan
IPR000060FamilyBCCT transporter familyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR30047HIGH-AFFINITY CHOLINE TRANSPORT PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0006810Biological ProcesstransportInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0016021Cellular ComponentmembraneInterproscan
GO:0022857Molecular Functiontransmembrane transporter activityInterproscan
GO:0071705Biological Processnitrogen compound transportInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K02168betT, betS; choline/glycine/proline betaine transport protein-Transportersko02000deepkoala

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