Gene detail

Detailed information of Pocillopora_acuta_HIv2___TS.g3070.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xfSc0000009:312591...319378
NR annotation: RMX41494.1, hypothetical protein pdam_00012242 [Pocillopora damicornis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Pocillopora_acuta_HIv2___TS.g3070.t1

ATGCCTCACGGTCACAGCGTACTCATAGTTCTCCTGCTTCTTTGTCAAATCCTGGGCTTGATATTGTTCCTAAGAGGCTTCTTCCCGCTTAAGAAAGCCATAGATGGAAGAGCAACTAACGAGAATCTTCCACCTGAGCCATCATTTGAAGGGAAAGGAGATCTTTTGCCTCCGAAATTTGGAAGAGTGGTCATCATGTTGATAGATGCACTGAGAGCAGATTTTGTTTACAGTGAGCAGATAAGGATGCCTTTTACGCAAGAACTGATCAGACTAAATAAATCATTCAGTGAGGATATTCATGTACATATTTACTATCCTTGTGTAATATTCCTCAGTTTCATGGCAAAGGCACATCCACCAACTGTCACTATGCCAAGAATTAAGGCACTCACAACAGGTGGCATACCAGGATTTATTGATGTTGTTCTCAATTTGGACTCAAGTTCTTTACAAGAAGACAGTTTGATCAGTCAGATGAAGTTTGCAGATAAGAAGCTTGTTTTTTATGGTGACGATACCTGGATGAAGCTGTTTCCCGGACACTTTGAAAGAACTGATGGAACCACGTCATTTTTTGTGACTGATTATACAGAGGTAGATAACAATGTTACAAGACACATTGGTAAAGAGTTGAGAAGCAATGACTGGGATGTTATGATTCTTCATTACCTGGGCCTTGATCATATAGGACATATTGCAGGACCTTCAAGTCCCCTAGTTGGACCAAAACTCTTAGAAATGGACCAAGTTGTAAGTGATATCTACAATGAAATGCTCCATTGGCATCAACAAAGAAAGGCAACATCATTATTGGTGCTGTGCGGTGATCATGGAATGAGTGAGGTAGGCAGTCATGGTGGAGCATCTTTGGCAGAGACAAACACACCCCTTGTGTTTATGAGCCCATTATTTGAGAATGGTGGAGGTGAAGAGTTTTCAAAGAAACAAGTTCAACAAATTGATCTTGTTCCAACCTTGAGTCTTCTCTTGGGGCTTCCTGTACCTCAAAACAGCTTAGGAATCCTTCTTCCCGAACTATTCGGTTCCCATAGTGCAAGAGAAAAGCTACGAGCAATGCAGCTTAATTCACACCAACTATCTCAAGTGCTCATCACAAATGGGCATTCTGTTGACAACATGTGGGAACCTCAACACGCCCGCAAGCTGCACTCTGATTGGCTGAAATCAGCAGAGGTTGACCTAAGTACTACAAGAAACCAGATTACCTCAGCAACTAAGGTTGCTAAGCAGTACATCCTGGCACTTCAGAAAATGAGTGGTCATGTGACAGCCTCTCTTTCAAACTACGACCTACATGCTATGATTTACGGCATAGCTATTCTTTTTCAAACTCTATACTGGTTCGTCTGTGGTTTGCTTCAACTTTCGTTTAACATGAAGACAAGAGATGAGATGAATTTTTCAGCAACAACTGTTATTGTTGTGAGCGGCGCTGTTCTACTTGTTGCAGTTCTTCATCTCTCTACTTGCTCCAGCACAGTGTTTGATGGAAGCGACATTTTGTGTTCAGTAACTAGCCTGGAATCTATCGTTCTCTCTTCTATATTTGCATTGCTATCAGGAGTCACACTTGGATCTGTTCTGATTGGTCTTTTTCATCATTTTTCAAGCTCTCAGCCTTTTTTCTGGGTGGTTATATCAACCCTTTCATCGCTTTTTCAAAATAAGACTTGCTGCTTTCTTGTCATAGGAGTTTTCCTCCATGTTGTCAGTCTCCCTTCAAGTAGTTTTGTAGAAGAAGAACATCAAACTTGGTACCTTTTGACATCTACTTTGTTCGTTATCATTTTTCTTGAGAAAATCACATCTTGTAAGCATCTCAATGAAACAGAACTTCACCATCGTTCGGTGATAAAGGACGAGGACTCAGGCAATAACAAGACACACAAATGTGGGAAAGGAAAGTCTTTTGAGCTTTACAGTAAACTTGGTGACGCTAGTTCTCACAAAAATTCTCACCATTCCACAATAAGTAGACATAACGCGGATGGGCTTTGCTTGACGAGTCAAGACGTTGATAGGATAAGGACTAGAACTGAAAATGCAGTCTCGAACCAAGATCTTTCTCGGTCAGTTTCAACTTCAACGGGATCGGGGAATCACATAAATGAAAAAAGAGCTTTGGGACTGGCAGTCATGACGTCCAAGAAGGGAGTTTTGTGGAAACTTCTGCTATGTTTTGTACTTCTTGTTTTAGGAAGATTGTCAAGGAGCTGGAACCAAACTGGAATAAAATGGGCAGATAGACCTGATATTGGAGACTGGCTTGTGAAGCCTTACAACCGAAAAGTGCTGTCTTTAAGTTATTTTGTATCGCTTCTCTTCATCGTAGGATTTCGCTACAACTGTCAAAATGTGCTAATCACCCTTGTCTTTGTTGTTGGTGTTGTAAGCGCTTACGTATATCGGACTGTCACAGGAAGTCTTCAGTTACCATGGATACCGAATGAACCTATCACGAAGGGGGTCCTAGCAGCACGATTAACGTATTGTTGCGTGGCAATAATAGCAATAGGGAATGTTATTAACTTATGTAGGAGAAAGAGAAACAGCGATAAGAAAAAGACTTTCCAGGAATATAATATTGACGTCTGTGGATCGTTAGAAGGGATTCAATCAGCTTTACTATTGTTAGAAATTCTCCTTCAGAGGCCTCACAACGCACCACTTTTAGCGGTCTTTGTGGTTCAAGAACATATCTTGAGGAAATTGCTCTGGAAAAGTCAGGAGAACACATGGCTTATTGTACTCAGCTCTTTGTGGATGGGACACGCTATGTACTTTTCCTTGGGAAACTCCAACAGCCTTGCGTCGGTGGATATATCAGCTGGCTATGTGGGATTAGAGGACCATATACCTGTTATTGTGGGGCCCTTAACATTTGTAGCTACTTACTGTGGGCTTTTACTTTGGCTAATGGCAGCAGTGTTGTCTATTGTGAGAAACGCTCGAGATGTTAAGAGGTTGCCCTGCACTGGGCATGCACCATCTGGTGACAGAAGACATGGTCGACTGAAAATCACCTGTACCACACTGTCCTGGCTTAGCTCGGTTACAGTATTCTCTCCATCAAGTGTGTTACGTTATCTCACTCTACCAGGCTCTGATCCTCTGTGTCTACTGTACGTTGGTATTTGTTCAGCGGTATCATCTGTTTGTTTGGAGTGTCTTCTCACCAAAGTTGTTGTACGAAGCGATGAAGACTCTTTTGTTAATTTTATGTGTTATTGTTGTACTTTGCTTGATGACTTTAGTCGGGAGAACGAAAATAATTTATTCAGAGAAGCCTGA

Transcript

Pocillopora_acuta_HIv2___TS.g3070.t1

Protein

Uniprot

Uniprot term	Description
Q5H8A4	GPI ethanolamine phosphate transferase 2, catalytic subunit OS=Homo sapiens OX=9606 GN=PIGG PE=1 SV=1
Q4WDM5	GPI ethanolamine phosphate transferase 2 OS=Aspergillus fumigatus (strain ATCC MYA-4609 / CBS 101355 / FGSC A1100 / Af293) OX=330879 GN=las21 PE=2 SV=1
Q09782	GPI ethanolamine phosphate transferase 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=las21 PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF19316	PIGO_PIGG	GPI ethanolamine phosphate transferase membrane region	Family	Interproscan
PF01663	Phosphodiest	Type I phosphodiesterase / nucleotide pyrophosphatase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR039527	Family	GPI ethanolamine phosphate transferase 2	Interproscan
IPR037674	Domain	GPI ethanolamine phosphate transferase 2, N-terminal	Interproscan
IPR045687	Domain	GPI ethanolamine phosphate transferase 2, C-terminal	Interproscan
IPR017850	Homologous_superfamily	Alkaline-phosphatase-like, core domain superfamily	Interproscan
IPR002591	Family	Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23072	PHOSPHATIDYLINOSITOL GLYCAN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0006506	Biological Process	GPI anchor biosynthetic process	Interproscan
GO:0030176	Cellular Component	obsolete integral component of endoplasmic reticulum membrane	Interproscan
GO:0051267	Molecular Function	CP2 mannose-ethanolamine phosphotransferase activity	Interproscan
GO:0051377	Molecular Function	mannose-ethanolamine phosphotransferase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K05310	PIGG, GPI7; ethanolamine phosphate transferase 2 subunit G	EC:2.7.-.-	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	ko00563	deepkoala