Gene detail

Detailed information of Pocillopora_acuta_HIv2___TS.g30724.t2 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xfSc0000018:2109160...2111345
NR annotation: KAJ8349521.1, hypothetical protein SKAU_G00246510 [Synaphobranchus kaupii]

Gene Structure

More details in Jbrowse

Sequence

CDS

Pocillopora_acuta_HIv2___TS.g30724.t2

ATGCCGTCACGGCTGGACGTACCTCACAAGAATCCATCACCTGGTCTGACAGTCTCAGGGCTGCATTCCATAACGCTCAAAAGGCCCTATCCTCAGCCCTCTCTATCACCTTACCTAGACCTGAGGACCAACTATGGCGCTAAGCTGCGGGGCACTCAGACAACGTGGCTTCCATGCGAAGTAGAAGCCCTCTCCATCGCTGCGGCTACAAAGCACTTCAGTCCATACCTCATCCAGTCATCCAATAAAGCCTGTATCCTAACGGACAGTAAGTCATGCGTCCAGGCTTATGAGAAGCTATGCCGCGGCGAGTTCTCCGCAAGTCCTCGCGTATCTACTTTCCTGTCAGTTGTCAGCCGCTACCAGGCCTCAGTGCGACACGTCTCCGGCGCCTCTATCCTCCAGTCAGACTTCGCGAGTCGAAATGCTGCCCCTTGTGAGAATGAAACCTGTCAGATTTGCCTGTTTATCGCCTCAACCAGAGATTCTGTTGTCCGAGCCGCGACTGTCCAGGACATCCTCCAAGGCAATGCCCGCCTCCCTTTCACCAGCCGTCCGGCCTGGTTGGCCATACAGTCTGAATGCCCAGACCTACGCCGCACACACGCACACCTTGTCCAAGGCACAAGGCCTTCCAAGAAGCTCACAAACATCAAGGACGTCAAACGCTATTTGCAGATCGCCTCAATCGCAAGTGATGGCCTACTCGTCGTCCAACGTCATGATCCCTTGTCACCGACCAGAGAGTGTATTATTGTCCCTCACCAGGCCTTGGATGGCCTCTTGACAGCCCTTCACATTCAGCTCAGCCACCCTTCTTGTCACCAGTTAAAAATGGTTGCCAAGCGTTATCTGTTTGCCCTCGACCTGGACAAGGCAGTCTCCCGTGTTTCCGATGGATGCCACTCCTGTGCAGCAATTCAGAGATCACCAACAGCACGAACTGACCAGTCCACTTCGCCTCCACCTGAAACTATTGGGCAGTCCTTTGCGGCAGATGTCATAAAACGTTCTCGCCAACTTATCTTTGTACTCCGTGAAACAGTGACCTCTTACACGTCCAGTCTCTTTCTTGAGAACGAACGCCACCAAACTTTGCGTGATGCCATTATAAAGCTTTGCGTGGAAATGCGCCCCATGGATGGTCCACCTGCTGTGATCCGCACCGACCCTGCTCCCGGATTCAAGGCCCTTGTCAATGATTCACTCTTACAGAAACACAGAATCACAATTGAGCTTGGCCATGCCAAAAATCCCAACAAGAACCCCGTTGCAGAGAGAGCAGTCCAAGAATTGGAGAATGAGCTGTTACGTCAGGAGCCTCTCGGTAGTTCTGTCTCTCCCCTCACCCTTGCCGTAGCCACTTCAGTCTTAAACTCACGTATCCGTTCAAGAGGGCTTTCCTCTCGAGAAATATGGACCCAGCGGGATCAGTTCTCAAACAAACAGTTACTCCTCGCAGATGACCACATAATTTCCCTCCAGCATGAGCAGCGTCTCTCCAACCATTCCCTCAGTGAACGTTCCAAAGCTCCTGCTCAGTCAAGGCGTCCTACCCCCCTGATCGATATTGGCGATCTTGTGTACCTTCATTCTGACCTCAACAAGTCTCGTGCTCGTGACCGCTATCTCGTTGTAGCCATTGATCCTCCATTCTGCAACATCAAAAAGTTCATTGGATCCCAGTTGCGAAGTTCATCGTACCATGTCAAGCTATCTGAGTGCTTCAAGGTCCCATCTGACTTGGGTGATCCCTTCCGTGCCTCTCCGACCCTACGCAAACACTACTCTGATTCTGACGACGAAGATGGTCCTACTACAACGACTCACCCTCCCCCCTCTTTGCCTGCCATTCCTGAGGCCATCGCAGCTTCCACACACCCACCAGTTGTCAACCCTCAGTCTTACAGTCCAGCCCCTGCCTCTCCCGTTGACCATACCATGGATGATTTCGCTACACAGTCGCCCTGCCCTGATCCTTCCCCAGTGGAGTATGCAGCCACCTCAGCGATGCCTTCTCCGCCTGCCCTACGGAGATCATCGCGCACCCGCCGTCCTCCTTCTCGTTTTGCAGATTATGACACTGAACTTTGA

Transcript

Pocillopora_acuta_HIv2___TS.g30724.t2

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
--	--	--	--	--

InterPro

InterPro term	Type	Description	Source
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR001584	Domain	Integrase, catalytic core	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
-	-	-

Gene Ontology

GO terms	Category	Description	Source
GO:0015074	Biological Process	DNA integration	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan