Gene detail

Detailed information of Pocillopora_acuta_HIv2___TS.g3489.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___Sc0000024:698474...704308
NR annotation: RMX46972.1, hypothetical protein pdam_00011918 [Pocillopora damicornis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
D3ZN95	Host cell factor 1 OS=Rattus norvegicus OX=10116 GN=Hcfc1 PE=1 SV=1
Q61191	Host cell factor 1 OS=Mus musculus OX=10090 GN=Hcfc1 PE=1 SV=2
P51611	Host cell factor 1 OS=Mesocricetus auratus OX=10036 GN=HCFC1 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF16746	BAR_3	BAR domain of APPL family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027267	Homologous_superfamily	AH/BAR domain superfamily	Interproscan
IPR003961	Domain	Fibronectin type III	Interproscan
IPR043536	Family	Host cell factor	Interproscan
IPR004148	Domain	BAR domain	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR036116	Homologous_superfamily	Fibronectin type III superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46003	HOST CELL FACTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0003713	Molecular Function	transcription coactivator activity	Interproscan
GO:0006338	Biological Process	chromatin remodeling	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0035097	Cellular Component	histone methyltransferase complex	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan