Gene detail

Detailed information of Pocillopora_acuta_HIv2___TS.g4484.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xfSc0000002:6336643...6347952
NR annotation: RCN52435.1, ribosomal protein L5 [Ancylostoma caninum]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q90YV7	Large ribosomal subunit protein uL5 OS=Ictalurus punctatus OX=7998 GN=rpl11 PE=2 SV=3
Q3T087	Large ribosomal subunit protein uL5 OS=Bos taurus OX=9913 GN=RPL11 PE=2 SV=3
Q6QMZ8	Large ribosomal subunit protein uL5 OS=Chinchilla lanigera OX=34839 GN=RPL11 PE=2 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00673	Ribosomal_L5_C	ribosomal L5P family C-terminus	Domain	Interproscan
PF00281	Ribosomal_L5	Ribosomal protein L5	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002132	Family	Large ribosomal subunit protein uL5	Interproscan
IPR031309	Domain	Large ribosomal subunit protein uL5, C-terminal	Interproscan
IPR022803	Homologous_superfamily	Large ribosomal subunit protein uL5 domain superfamily	Interproscan
IPR031310	Domain	Large ribosomal subunit protein uL5, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11994	60S RIBOSOMAL PROTEIN L11-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0003735	Molecular Function	structural constituent of ribosome	Interproscan
GO:0005840	Cellular Component	ribosome	Interproscan
GO:0006412	Biological Process	translation	Interproscan
GO:0022625	Cellular Component	cytosolic large ribosomal subunit	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K02868	RP-L11e, RPL11; large subunit ribosomal protein L11e	-	Ribosome	ko03011	deepkoala