Detailed information of Pocillopora_acuta_HIv2___TS.g5131.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xfSc0000004:1914190...1923837
NR annotation: XP_027044310.1, arginine-glutamic acid dipeptide repeats protein-like [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9P2R6Arginine-glutamic acid dipeptide repeats protein OS=Homo sapiens OX=9606 GN=RERE PE=1 SV=2
Q62901Arginine-glutamic acid dipeptide repeats protein OS=Rattus norvegicus OX=10116 GN=Rere PE=1 SV=2
Q80TZ9Arginine-glutamic acid dipeptide repeats protein OS=Mus musculus OX=10090 GN=Rere PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01426BAHBAH domainDomainInterproscan
PF00249Myb_DNA-bindingMyb-like DNA-binding domainDomainInterproscan
PF01448ELM2ELM2 domainFamilyInterproscan
PF00320GATAGATA zinc fingerDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001025DomainBromo adjacent homology (BAH) domainInterproscan
IPR013088Homologous_superfamilyZinc finger, NHR/GATA-typeInterproscan
IPR001005DomainSANT/Myb domainInterproscan
IPR043151Homologous_superfamilyBromo adjacent homology (BAH) domain superfamilyInterproscan
IPR017884DomainSANT domainInterproscan
IPR000949DomainELM2 domainInterproscan
IPR000679DomainZinc finger, GATA-typeInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13859ATROPHIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003682Molecular Functionchromatin bindingInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0043565Molecular Functionsequence-specific DNA bindingInterproscan
GO:0003714Molecular Functiontranscription corepressor activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan

TOP