Detailed information of Pocillopora_acuta_HIv2___TS.g5836.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xfSc0000001:594829...627537
NR annotation: CAH3040199.1, unnamed protein product [Pocillopora meandrina]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A2A259Polycystin-2-like protein 1 OS=Mus musculus OX=10090 GN=Pkd2l1 PE=1 SV=1
Q6IVV8Polycystin-2 OS=Danio rerio OX=7955 GN=pkd2 PE=1 SV=1
Q4GZT3Polycystin-2 OS=Bos taurus OX=9913 GN=PKD2 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00088TrefoilTrefoil (P-type) domainDomainInterproscan
PF01822WSCWSC domainDomainInterproscan
PF01477PLATPLAT/LH2 domainDomainInterproscan
PF20519Polycystin_domPolycystin domainDomainInterproscan
PF02010REJREJ domainFamilyInterproscan
PF13385Laminin_G_3Concanavalin A-like lectin/glucanases superfamilyDomainInterproscan
PF00801PKDPKD domainDomainInterproscan
PF08016PKD_channelPolycystin cation channelFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000519DomainP-type trefoil domainInterproscan
IPR008979Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR000601DomainPKD domainInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR035986Homologous_superfamilyPKD domain superfamilyInterproscan
IPR044913Homologous_superfamilyP-type trefoil domain superfamilyInterproscan
IPR003915FamilyPolycystic kidney disease type 2 proteinInterproscan
IPR001024DomainPLAT/LH2 domainInterproscan
IPR051223FamilyPolycystinInterproscan
IPR002889DomainCarbohydrate-binding WSCInterproscan
IPR022409DomainPKD/Chitinase domainInterproscan
IPR046791DomainPolycystin domainInterproscan
IPR036392Homologous_superfamilyPLAT/LH2 domain superfamilyInterproscan
IPR002859DomainPKD/REJ-like domainInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR013122DomainPolycystin cation channel, PKD1/PKD2Interproscan
IPR000421DomainCoagulation factor 5/8 C-terminal domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10877POLYCYSTIN FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005262Molecular Functioncalcium channel activityInterproscan
GO:0050982Biological Processdetection of mechanical stimulusInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K04988PKD1L2; polycystin 1L2-Ion channelsko04040deepkoala

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