Gene detail

Detailed information of Pocillopora_acuta_HIv2___TS.g5939.t1a in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xfSc0000001:1642154...1647015
NR annotation: XP_027043813.1, low choriolytic enzyme-like [Pocillopora damicornis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
P55115	Zinc metalloproteinase nas-15 OS=Caenorhabditis elegans OX=6239 GN=nas-15 PE=2 SV=2
Q20191	Zinc metalloproteinase nas-13 OS=Caenorhabditis elegans OX=6239 GN=nas-13 PE=2 SV=5
P42662	Astacin-like metalloendopeptidase OS=Coturnix japonica OX=93934 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01477	PLAT	PLAT/LH2 domain	Domain	Interproscan
PF01400	Astacin	Astacin (Peptidase family M12A)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001024	Domain	PLAT/LH2 domain	Interproscan
IPR001506	Domain	Peptidase M12A	Interproscan
IPR036392	Homologous_superfamily	PLAT/LH2 domain superfamily	Interproscan
IPR024079	Homologous_superfamily	Metallopeptidase, catalytic domain superfamily	Interproscan
IPR006026	Domain	Peptidase, metallopeptidase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10127	DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0004222	Molecular Function	metalloendopeptidase activity	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan
GO:0008237	Molecular Function	metallopeptidase activity	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan