Detailed information of Pocillopora_acuta_HIv2___TS.g8218.t1b in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___Sc0000003:5092875...5107367
NR annotation: CAH3154384.1, unnamed protein product, partial [Pocillopora meandrina]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q7TN88Polycystin-1-like protein 2 OS=Mus musculus OX=10090 GN=Pkd1l2 PE=2 SV=1
Q9Z0T6Polycystin family receptor for egg jelly OS=Mus musculus OX=10090 GN=Pkdrej PE=2 SV=2
Q2EG98Polycystin-1-like protein 3 OS=Mus musculus OX=10090 GN=Pkd1l3 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02010REJREJ domainFamilyInterproscan
PF00801PKDPKD domainDomainInterproscan
PF13385Laminin_G_3Concanavalin A-like lectin/glucanases superfamilyDomainInterproscan
PF01477PLATPLAT/LH2 domainDomainInterproscan
PF08016PKD_channelPolycystin cation channelFamilyInterproscan
PF20519Polycystin_domPolycystin domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR035986Homologous_superfamilyPKD domain superfamilyInterproscan
IPR002859DomainPKD/REJ-like domainInterproscan
IPR000601DomainPKD domainInterproscan
IPR001024DomainPLAT/LH2 domainInterproscan
IPR022409DomainPKD/Chitinase domainInterproscan
IPR000203Conserved_siteGPS motifInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR013122DomainPolycystin cation channel, PKD1/PKD2Interproscan
IPR014010DomainREJ domainInterproscan
IPR000434FamilyPolycystic kidney disease type 1 proteinInterproscan
IPR046791DomainPolycystin domainInterproscan
IPR046338Homologous_superfamilyGAIN domain superfamilyInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR036392Homologous_superfamilyPLAT/LH2 domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46730POLYCYSTIN-1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005261Molecular Functionmonoatomic cation channel activityInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0006816Biological Processcalcium ion transportInterproscan

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