Detailed information of Pocillopora_acuta_HIv2___TS.g9610.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___Sc0000009:5703530...5722743
NR annotation: CAH3031033.1, unnamed protein product [Pocillopora meandrina]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8WUH2Transforming growth factor-beta receptor-associated protein 1 OS=Homo sapiens OX=9606 GN=TGFBRAP1 PE=1 SV=1
Q3UR70Transforming growth factor-beta receptor-associated protein 1 OS=Mus musculus OX=10090 GN=Tgfbrap1 PE=1 SV=1
A4IG72Transforming growth factor-beta receptor-associated protein 1 homolog OS=Danio rerio OX=7955 GN=tgfbrap1 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10366Vps39_1Vacuolar sorting protein 39 domain 1RepeatInterproscan
PF00780CNHCNH domainRepeatInterproscan
PF10367Vps39_2Vacuolar sorting protein 39 domain 2DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019452DomainVacuolar sorting protein 39/Transforming growth factor beta receptor-associated domain 1Interproscan
IPR001180DomainCitron homology (CNH) domainInterproscan
IPR032914FamilyVam6/VPS39/TRAP1 familyInterproscan
IPR019453DomainVacuolar sorting protein 39/Transforming growth factor beta receptor-associated domain 2Interproscan
IPR000547RepeatClathrin, heavy chain/VPS, 7-fold repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12894CNH DOMAIN CONTAININGInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006914Biological ProcessautophagyInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0016192Biological Processvesicle-mediated transportInterproscan
GO:0034058Biological Processendosomal vesicle fusionInterproscan
GO:0006886Biological Processintracellular protein transportInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K20177VPS3, TGFBRAP1; vacuolar protein sorting-associated protein 3-Membrane traffickingko04131deepkoala

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