Detailed information of Porites_compressa_HIv1___RNAseq.g7253.t1b in Porites compressa

Genomic Location: Porites_compressa_HIv1___Sc0000069:628211...676129
NR annotation: no NCBI-NR hit recorded
Species Porites compressa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Gene family
Family typeMembership / link
Ubiquitin familyUBD|Other|Beta-prp · all ubiquitin genes in this species
Ubiquitin familyE3|E3 adaptor Cullin RING|CDC20 · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF15911
all species →		WD40_3WD domain, G-beta repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR040379
all species →		FamilyWD repeat-containing protein 19/dyf-2Interproscan
IPR039468
all species →		RepeatWDR19, WD40 repeatInterproscan
IPR001680
all species →		RepeatWD40 repeatInterproscan
IPR015943
all species →		Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14920
all species →		OSMOTIC AVOIDANCE ABNORMAL PROTEIN 1/WD REPEAT MEMBRANE PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005929
all species →		Cellular ComponentciliumInterproscan
GO:0030991
all species →		Cellular Componentintraciliary transport particle AInterproscan
GO:0035721
all species →		Biological Processintraciliary retrograde transportInterproscan
GO:0060271
all species →		Biological Processcilium assemblyInterproscan
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for Porites_compressa_HIv1___RNAseq.g7253.t1b.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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