Gene detail

Detailed information of Porites_compressa_HIv1___RNAseq.g8601.t1 in Porites compressa

Genomic Location: Porites_compressa_HIv1___Sc0000148:207475...214978
NR annotation: no NCBI-NR hit recorded
Species Porites compressa · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14050 all species →	Nudc_N	N-terminal conserved domain of Nudc.	Family	Interproscan
PF04969 all species →	CS	CS domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR025934 all species →	Domain	NudC N-terminal domain	Interproscan
IPR037898 all species →	Family	NudC family	Interproscan
IPR007052 all species →	Domain	CS domain	Interproscan
IPR008978 all species →	Homologous_superfamily	HSP20-like chaperone	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12356 all species →	NUCLEAR MOVEMENT PROTEIN NUDC	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0006457 all species →	Biological Process	protein folding	Interproscan
GO:0051082 all species →	Molecular Function	unfolded protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for Porites_compressa_HIv1___RNAseq.g8601.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.