Detailed information of Ppa0G002640 in Paragorgia papillata

Genomic Location: Contig00001:3352772...3391600
NR annotation: XP_028400316.1, protein CASP-like [Dendronephthya gigantea]
Species Paragorgia papillata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P70403Protein CASP OS=Mus musculus OX=10090 GN=Cux1 PE=1 SV=2
Q13948Protein CASP OS=Homo sapiens OX=9606 GN=CUX1 PE=1 SV=2
Q5R8V1Protein CASP OS=Pongo abelii OX=9601 GN=CUTL1 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004798 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08172
all species →		CASP_CCASP C terminalFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR012955
all species →		DomainCASP, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14043
all species →		CCAAT DISPLACEMENT PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000977
all species →		Molecular FunctionRNA polymerase II transcription regulatory region sequence-specific DNA bindingInterproscan
GO:0000981
all species →		Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0006357
all species →		Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0000139
all species →		Cellular ComponentGolgi membraneInterproscan
GO:0006891
all species →		Biological Processintra-Golgi vesicle-mediated transportInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for Ppa0G002640.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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