Gene detail

Detailed information of Ppa0G002740 in Paragorgia papillata

Genomic Location: Contig00001:3477597...3479237
NR annotation: CAB4013893.1, E3 ubiquitin- ligase NRDP1 [Paramuricea clavata]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
E9QIN8	Kelch-like protein 41a OS=Danio rerio OX=7955 GN=klhl41a PE=2 SV=1
Q86KX6	TNF receptor-associated factor family protein DDB_G0272348 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0272348 PE=3 SV=2

Gene family	Subfamily
Ubiquitin Family	E3\|E3 activity RING\|U-box

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13923	zf-C3HC4_2	Zinc finger, C3HC4 type (RING finger)	Domain	Interproscan
PF01344	Kelch_1	Kelch motif	Repeat	Interproscan
PF13854	Kelch_5	Kelch motif	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006652	Repeat	Kelch repeat type 1	Interproscan
IPR001841	Domain	Zinc finger, RING-type	Interproscan
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR015915	Homologous_superfamily	Kelch-type beta propeller	Interproscan
IPR001293	Domain	Zinc finger, TRAF-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45632	LD33804P	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K10461	KLHL24_35; kelch-like protein 24/35	-	Ubiquitin system	ko04121	deepkoala