Gene detail

Detailed information of Ppa0G003510 in Paragorgia papillata

Genomic Location: Contig00001:4729643...4731262
NR annotation: CAB3979372.1, TNF receptor-associated factor 6 [Paramuricea clavata]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
Q9H4P4	E3 ubiquitin-protein ligase NRDP1 OS=Homo sapiens OX=9606 GN=RNF41 PE=1 SV=2
Q5R7T5	E3 ubiquitin-protein ligase NRDP1 OS=Pongo abelii OX=9601 GN=RNF41 PE=2 SV=1
Q5FWL3	E3 ubiquitin-protein ligase NRDP1 OS=Xenopus laevis OX=8355 GN=rnf41 PE=2 SV=1

Gene family	Subfamily
Ubiquitin Family	E3\|E3 activity RING\|U-box

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01344	Kelch_1	Kelch motif	Repeat	Interproscan
PF02176	zf-TRAF	TRAF-type zinc finger	Family	Interproscan
PF13923	zf-C3HC4_2	Zinc finger, C3HC4 type (RING finger)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR015915	Homologous_superfamily	Kelch-type beta propeller	Interproscan
IPR001841	Domain	Zinc finger, RING-type	Interproscan
IPR001293	Domain	Zinc finger, TRAF-type	Interproscan
IPR006652	Repeat	Kelch repeat type 1	Interproscan
IPR051746	Family	Kelch domain-containing protein 8	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46260	RING-TYPE DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan