Gene detail

Detailed information of Ppa0G003800 in Paragorgia papillata

Genomic Location: Contig00001:5094469...5104894
NR annotation: CAB4000511.1, probable proline dehydrogenase 2 [Paramuricea clavata]
Species Paragorgia papillata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6PAY6	Hydroxyproline dehydrogenase OS=Xenopus laevis OX=8355 GN=prodh2 PE=2 SV=1
Q8VCZ9	Hydroxyproline dehydrogenase OS=Mus musculus OX=10090 GN=Prodh2 PE=1 SV=1
A6QQ74	Hydroxyproline dehydrogenase OS=Bos taurus OX=9913 GN=PRODH2 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001558 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01619 all species →	Pro_dh	Proline dehydrogenase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR015659 all species →	Family	Proline oxidase family	Interproscan
IPR002872 all species →	Domain	Proline dehydrogenase domain	Interproscan
IPR029041 all species →	Homologous_superfamily	FAD-linked oxidoreductase-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13914 all species →	PROLINE OXIDASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004657 all species →	Molecular Function	proline dehydrogenase activity	Interproscan
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan
GO:0006562 all species →	Biological Process	proline catabolic process	Interproscan
GO:0010133 all species →	Biological Process	proline catabolic process to glutamate	Interproscan
GO:0071949 all species →	Molecular Function	FAD binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K11394	PRODH2; hydroxyproline dehydrogenase	EC:1.5.5.3	Arginine and proline metabolism	ko00330	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.