Genomic Location: Contig00001:5997641...6008368
NR annotation: XP_046840549.1, uncharacterized protein LOC124434697 isoform X1 [Xenia sp. Carnegie-2017]
Species Paragorgia papillata · all data for this species · gene families
| CDS |
| Ppa0G004570 |
| Transcript |
| Ppa0G004570 |
| Protein |
| Ppa0G004570 |
| UniProt accession | Description |
|---|---|
| P18887 | DNA repair protein XRCC1 OS=Homo sapiens OX=9606 GN=XRCC1 PE=1 SV=3 |
| Q9ESZ0 | DNA repair protein XRCC1 OS=Rattus norvegicus OX=10116 GN=Xrcc1 PE=1 SV=2 |
| Q60596 | DNA repair protein XRCC1 OS=Mus musculus OX=10090 GN=Xrcc1 PE=1 SV=2 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0001841 (this species only) |
| Ubiquitin family | UBD|ZnF|UBZ · all ubiquitin genes in this species |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01834 all species → | XRCC1_N | XRCC1 N terminal domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR008979 all species → | Homologous_superfamily | Galactose-binding-like domain superfamily | Interproscan |
| IPR002706 all species → | Domain | DNA-repair protein Xrcc1, N-terminal | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11370 all species → | DNA-REPAIR PROTEIN XRCC1 | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005634 all species → | Cellular Component | nucleus | Interproscan |
| GO:0006284 all species → | Biological Process | base-excision repair | Interproscan |
| GO:0000012 all species → | Biological Process | single strand break repair | Interproscan |
| GO:0003684 all species → | Molecular Function | damaged DNA binding | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K10803 | XRCC1; DNA-repair protein XRCC1 | - | DNA repair and recombination proteins | ko03400 | deepkoala |
