Detailed information of Ppa0G005290 in Paragorgia papillata

Genomic Location: Contig00002:412027...436540
NR annotation: XP_028400883.1, RIMS-binding protein 2-like isoform X1 [Dendronephthya gigantea]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9JIR0Peripheral-type benzodiazepine receptor-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Tspoap1 PE=1 SV=2
Q80U40RIMS-binding protein 2 OS=Mus musculus OX=10090 GN=Rimbp2 PE=1 SV=3
O15034RIMS-binding protein 2 OS=Homo sapiens OX=9606 GN=RIMBP2 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02183HALZHomeobox associated leucine zipperCoiled-coilInterproscan
PF07653SH3_2Variant SH3 domainDomainInterproscan
PF14604SH3_9Variant SH3 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003106DomainLeucine zipper, homeobox-associatedInterproscan
IPR003961DomainFibronectin type IIIInterproscan
IPR036028Homologous_superfamilySH3-like domain superfamilyInterproscan
IPR001452DomainSH3 domainInterproscan
IPR040325FamilyRIMS-binding protein 1/2/3Interproscan
IPR036116Homologous_superfamilyFibronectin type III superfamilyInterproscan
IPR035753DomainRIMS-binding protein, second SH3 domainInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14234RIM BINDING PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0043565Molecular Functionsequence-specific DNA bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0007274Biological Processneuromuscular synaptic transmissionInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K19922TSPOAP1, BZRAP1, RIMBP1; peripheral-type benzodiazepine receptor-associated protein 1-Membrane traffickingko04131deepkoala

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