Detailed information of Ppa0G005330 in Paragorgia papillata

Genomic Location: Contig00002:470952...474748
NR annotation: CAB3988620.1, E3 ubiquitin- ligase RNF185-like [Paramuricea clavata]
Species Paragorgia papillata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q96GF1E3 ubiquitin-protein ligase RNF185 OS=Homo sapiens OX=9606 GN=RNF185 PE=1 SV=1
Q91YT2E3 ubiquitin-protein ligase RNF185 OS=Mus musculus OX=10090 GN=Rnf185 PE=2 SV=1
Q5RFK9E3 ubiquitin-protein ligase RNF185 OS=Pongo abelii OX=9601 GN=RNF185 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006199 (this species only)
Ubiquitin familyE3|E3 activity RING|RING · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00097
all species →		zf-C3HC4Zinc finger, C3HC4 type (RING finger)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR017907
all species →		Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR001841
all species →		DomainZinc finger, RING-typeInterproscan
IPR045103
all species →		FamilyE3 ubiquitin-protein ligase RNF5/RNF185-likeInterproscan
IPR013083
all species →		Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR018957
all species →		DomainZinc finger, C3HC4 RING-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12313
all species →		E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005783
all species →		Cellular Componentendoplasmic reticulumInterproscan
GO:0006511
all species →		Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0044390
all species →		Molecular Functionubiquitin-like protein conjugating enzyme bindingInterproscan
GO:0061630
all species →		Molecular Functionubiquitin protein ligase activityInterproscan
GO:0071712
all species →		Biological Processobsolete ER-associated misfolded protein catabolic processInterproscan
GO:0046872
all species →		Molecular Functionmetal ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for Ppa0G005330.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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