Detailed information of Ppa0G006020 in Paragorgia papillata

Genomic Location: Contig00002:1230224...1237076
NR annotation: CAB4002013.1, Matrix metallo ase-9 [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q28275Fibronectin (Fragment) OS=Canis lupus familiaris OX=9615 GN=FN1 PE=2 SV=3
P00748Coagulation factor XII OS=Homo sapiens OX=9606 GN=F12 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00090TSP_1Thrombospondin type 1 domainDomainInterproscan
PF00040fn2Fibronectin type II domainDomainInterproscan
PF05270AbfBAlpha-L-arabinofuranosidase B (ABFB) domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR000562DomainFibronectin type II domainInterproscan
IPR036195Homologous_superfamilyAlpha-L-arabinofuranosidase B, arabinose-binding domain superfamilyInterproscan
IPR007934DomainAlpha-L-arabinofuranosidase B, arabinose-binding domainInterproscan
IPR013806Homologous_superfamilyKringle-like foldInterproscan
IPR036943Homologous_superfamilyFibronectin type II domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
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 Gene Ontology
GO termsCategoryDescriptionSource
GO:0046373Biological ProcessL-arabinose metabolic processInterproscan
GO:0046556Molecular Functionalpha-L-arabinofuranosidase activityInterproscan

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