Gene detail

Detailed information of Ppa0G007590 in Paragorgia papillata

Genomic Location: Contig00003:857422...861291
NR annotation: CAB3994825.1, Exonuclease 1 [Paramuricea clavata]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
B8AMS4	Flap endonuclease 1-B OS=Oryza sativa subsp. indica OX=39946 GN=FEN1b PE=3 SV=1
Q75LI2	Flap endonuclease 1-B OS=Oryza sativa subsp. japonica OX=39947 GN=FEN1B PE=2 SV=1
C5WU23	Flap endonuclease 1-B OS=Sorghum bicolor OX=4558 GN=FEN1-B PE=3 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00752	XPG_N	XPG N-terminal domain	Family	Interproscan
PF00867	XPG_I	XPG I-region	Family	Interproscan
PF08797	HIRAN	HIRAN domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006085	Domain	XPG, N-terminal	Interproscan
IPR006084	Family	XPG/Rad2 endonuclease	Interproscan
IPR029060	Homologous_superfamily	PIN-like domain superfamily	Interproscan
IPR006086	Domain	XPG-I domain	Interproscan
IPR036279	Homologous_superfamily	5'-3' exonuclease, C-terminal domain superfamily	Interproscan
IPR014905	Domain	HIRAN domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11081	FLAP ENDONUCLEASE FAMILY MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004518	Molecular Function	nuclease activity	Interproscan
GO:0017108	Molecular Function	5'-flap endonuclease activity	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0016818	Molecular Function	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	Interproscan