Detailed information of Ppa0G013440 in Paragorgia papillata

Genomic Location: Contig00008:66161...66979
NR annotation: CAB4007138.1, translin-associated X isoform X2 [Paramuricea clavata]
Species abbreviation PPAPI · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9JHB5Translin-associated protein X OS=Rattus norvegicus OX=10116 GN=Tsnax PE=1 SV=1
Q99598Translin-associated protein X OS=Homo sapiens OX=9606 GN=TSNAX PE=1 SV=1
Q5RC21Translin-associated protein X OS=Pongo abelii OX=9601 GN=TSNAX PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008028 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01997
all species →
TranslinTranslin familyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002848
all species →
FamilyTranslin familyInterproscan
IPR036081
all species →
Homologous_superfamilyTranslin superfamilyInterproscan
IPR016069
all species →
Homologous_superfamilyTranslin, C-terminalInterproscan
IPR016068
all species →
Homologous_superfamilyTranslin, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10741
all species →
TRANSLIN AND TRANSLIN ASSOCIATED PROTEIN XInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0043565
all species →
Molecular Functionsequence-specific DNA bindingInterproscan
GO:0003723
all species →
Molecular FunctionRNA bindingInterproscan
GO:0004521
all species →
Molecular FunctionRNA endonuclease activityInterproscan
GO:0005634
all species →
Cellular ComponentnucleusInterproscan
GO:0005737
all species →
Cellular ComponentcytoplasmInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for Ppa0G013440.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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