Gene detail

Detailed information of Ppa0G013740 in Paragorgia papillata

Genomic Location: Contig00008:352464...354857
NR annotation: CAB3985198.1, DC-STAMP domain-containing 2-like [Paramuricea clavata]
Species abbreviation PPAPI · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Ppa0G013740

ATGCCAAGAGGAAAAGGTGCAGTGAAGTCTGTAACGGAAACACGGCAGCTTGCAAACAATACTGGTACAAGCGAGGAAGGAACGAGTCTATGTAGTAGTGTGGAAATGAAGGACATTGACCTAACAGCTTCAAGCCAAGAACACGAAAGCGATTCGTGTGTGGATATTGGCGACATGTCTGTCGATTCGACTGTATCGTCCGACAAAGAGAAGGAGAAAGATTTGCTACCAAGGAAACCCAAGCGGCTTTTCATGATTACAGGTAGCAAGAAGAAGGACGCGAAGCTGAAGAATAATCACGGCCAGACAGACGTCAACAAAGGCAAGAGAAAGAACCACACATGCAACACTGATAAGAAGACACAAACTAAACTCGACACGGAGTCTTTAAACAATGAAGACCCCAAGGTAGCTGAAGTCAAAGAAGCTTCAAAAAGGGACTTCGACGACGACGAACACCCGTACGAGGACCCAAGCCTGCTGAATAATTCAGCAACGCTAGAAGAAAACAAGCAGAGTCCCAAGATGGAGCCGAATGAACGACCACAAAGCCCTGGTCTTCAAGATAAACGACAGAAAAGTAAATCAACAGAAAGCATCAAAGCAGCCGTGAAGACGGTGAAAGAGAAGCATCCTTCTATCATGTCTGAACGCTCAAGTGCTCGCAGTATATTTGCATTTCTCGTGGCCTTGCTTCTTTCACTTATTATTTTCTTGTCCTTCTTCTTTCTTCTTCGTTCCGACGCCGTTTTGTCGGTCGTTGTGGCCATTCTGGTATACCTTGTCGTGTTCATAGTCTTGGGGTTTCTGGATATGGGCAGAATCAAGTGCATGATATTGCTCTTCCTACCAAGTTTGTGCAGCCGAGGAGGAAAAGTGACCGTGTATTTATTGCTTTTGTATTTCATTATTAAAGGACCACTGTGTAATACAATTGAAAACATTCAAACTGTCCGTACATCACTAAAATGTGTAATCAATCAACGTCCTGAAATACTCGAAGAGAGACTTCAGACTTTCTTAACTGCACAGAATTGCATAAGCTCTGCACGGAATATCTCGACGAGAAATCAGTCAGTTGAAACAGCGCTAAAATGTCTCGAAAAGATGTGTTTTTCAGCAAAGGATAAATTGAAACAAAATTGTGCTTCCAAGAAGCCTAGTATTTTACGCAGGGAGTGCAATGTCGCAAACGATTTAAAATGTAACAATTCCCAGATTCTCAAAATGTCAGGGGATTGTCCAAAGGCTAAGCTCCATAAAGCTCCTTGTCGGAAGGAGTTTGATAACATTCTGGAACTTCTTGGTGGGAATGGGATTGGAGGTGATGATTGTGAATTTCTGGGGATAATTGGGATGCTGTTGCCACTACTGATCTTGGTACTGTTCTACGAAGGGTACAATTATGAGAAAAACTATCGAACTTATAACAATTTTCATAATTACTTCCTCACAGGCCATTTTCAGTGTATCGATCAGAGCCGAAGTTCTTGTGACCGTGAAGCAGTTTTACCCCTGAGGAAAGTCGAGCTACGCAACCATGTCCGACCATCAACAGTGTTCCATTTAACGGATGGCGAAAAGAAGTTGTTATGTAAAAGTCTTAAAATGTACATGATCTTCCTTTTGTTCATTTTGTTTCTAATCTTGGCTGATCTTTATACATTTCGGATGTTCAACATTGACAGTGAAGACAATCACAGCTCAAATATATCAAACCACAGCTATTTTAACAATAAAAGCAAGCATTTTCAGGATATTGTAAGTAATGTCACAGCTGGTCTAAATGCAACAAATGCTACCATGCCAGCAAGCAACTCCGTTAAGATACCGGTACCAATGGAAACTGGTAGAATCTGCCTGGCTATAGTAAAGTCACCTGGCTCTATTTCAAAAATTGTCATGCCAGTCTTCCTCTCAATTCTACTGTTCATCATTCTCCTTCAAGCACATTTGTTGAGATTTCAGTGGTATGTATGCAGCAAGCTTTACAGTGGCAGAGAAAAGGAAAGAGTGTTTTATTTATATAATAAAATACTCGAAGACCGGATCCAGTTGGTAGAGGATTGCCGAAAGCGAATGAAATGTTATCATCGTGAAATGAAGACACTAAATGCCATTGAACCGACGAGAGTTCTTACTCGGCAAGCCAAATGGCTTTCAAAAGTTTTCAAGTTTTTCCGCATCAATTTGAGAAAGTGTGTGATTTGCAACGATTCTGAGAAGCCAACGTTTGCAATCTGTCATGGTGCAGATTGTTCTGGGGTCTATTGTTTAGAGTGTTCATTTGATATTGACAAGAAGTGCTTGTACTGTGACACAGACTTAAAGAAAAGTTTGTCAGTAAGACAGGCTAGTGCAGCAGACATTAGTTCCAGAGAATCGTTAGTATAA

Transcript

Ppa0G013740

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9VU52	Protein sneaky OS=Drosophila melanogaster OX=7227 GN=snky PE=2 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0009043 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07782 all species →	DC_STAMP	DC-STAMP-like protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR051856 all species →	Family	Cell Surface Receptor and E3 Ligase Protein	Interproscan
IPR012858 all species →	Domain	Dendritic cell-specific transmembrane protein-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21041 all species →	DENDRITIC CELL-SPECIFIC TRANSMEMBRANE PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016020 all species →	Cellular Component	membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K22375	DCST1; E3 ubiquitin-protein ligase DCST1	EC:2.3.2.27	Ubiquitin system	ko04121	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.