Detailed information of Ppa0G014250 in Paragorgia papillata

Genomic Location: Contig00008:892829...896172
NR annotation: XP_028398490.1, rRNA-processing protein FCF1 homolog [Dendronephthya gigantea]
Species Paragorgia papillata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q32PD0rRNA-processing protein FCF1 homolog OS=Bos taurus OX=9913 GN=FCF1 PE=2 SV=1
Q9Y324rRNA-processing protein FCF1 homolog OS=Homo sapiens OX=9606 GN=FCF1 PE=1 SV=1
Q5RFQ0rRNA-processing protein FCF1 homolog OS=Pongo abelii OX=9601 GN=FCF1 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006493 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04900
all species →		Fcf1Fcf1FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR037503
all species →		DomainrRNA-processing protein Fcf1, PIN domainInterproscan
IPR029060
all species →		Homologous_superfamilyPIN-like domain superfamilyInterproscan
IPR002716
all species →		DomainPIN domainInterproscan
IPR006984
all species →		FamilyrRNA-processing protein Fcf1/Utp23Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12416
all species →		UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005730
all species →		Cellular ComponentnucleolusInterproscan
GO:0032040
all species →		Cellular Componentsmall-subunit processomeInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K14566UTP24, FCF1; U3 small nucleolar RNA-associated protein 24-Ribosome biogenesisko03009deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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