Gene detail

Detailed information of Ppa0G014550 in Paragorgia papillata

Genomic Location: Contig00008:1164292...1168844
NR annotation: XP_028410360.1, uncharacterized protein LOC114532977 [Dendronephthya gigantea]
Species Paragorgia papillata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5FVJ6	Seipin OS=Rattus norvegicus OX=10116 GN=Bscl2 PE=1 SV=1
Q9Z2E9	Seipin OS=Mus musculus OX=10090 GN=Bscl2 PE=1 SV=2
Q96G97	Seipin OS=Homo sapiens OX=9606 GN=BSCL2 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006500 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF06775 all species →	Seipin	Putative adipose-regulatory protein (Seipin)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR009617 all species →	Family	Seipin family	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21212 all species →	BERNARDINELLI-SEIP CONGENITAL LIPODYSTROPHY 2 HOMOLOG BSCL2 PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0019915 all species →	Biological Process	lipid storage	Interproscan
GO:0030176 all species →	Cellular Component	obsolete integral component of endoplasmic reticulum membrane	Interproscan
GO:0034389 all species →	Biological Process	lipid droplet organization	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K19365	BSCL2; seipin	-	Lipid metabolism	-	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.