Detailed information of Ppa0G015020 in Paragorgia papillata

Genomic Location: Contig00010:433406...519855
NR annotation: XP_028410970.1, guanine nucleotide exchange factor VAV2-like isoform X2 [Dendronephthya gigantea]
Species Paragorgia papillata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P52735Guanine nucleotide exchange factor VAV2 OS=Homo sapiens OX=9606 GN=VAV2 PE=1 SV=2
Q60992Guanine nucleotide exchange factor VAV2 OS=Mus musculus OX=10090 GN=Vav2 PE=1 SV=1
P15498Proto-oncogene vav OS=Homo sapiens OX=9606 GN=VAV1 PE=1 SV=4
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002927 (this species only)
Ubiquitin familyUBD|Other|SH3 · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00017
all species →
SH2SH2 domainDomainInterproscan
PF00621
all species →
RhoGEFRhoGEF domainDomainInterproscan
PF00018
all species →
SH3_1SH3 domainDomainInterproscan
PF00169
all species →
PHPH domainDomainInterproscan
PF00307
all species →
CHCalponin homology (CH) domainDomainInterproscan
PF00130
all species →
C1_1Phorbol esters/diacylglycerol binding domain (C1 domain)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000980
all species →
DomainSH2 domainInterproscan
IPR000219
all species →
DomainDbl homology (DH) domainInterproscan
IPR001452
all species →
DomainSH3 domainInterproscan
IPR002219
all species →
DomainProtein kinase C-like, phorbol ester/diacylglycerol-binding domainInterproscan
IPR036860
all species →
Homologous_superfamilySH2 domain superfamilyInterproscan
IPR036028
all species →
Homologous_superfamilySH3-like domain superfamilyInterproscan
IPR001849
all species →
DomainPleckstrin homology domainInterproscan
IPR035899
all species →
Homologous_superfamilyDbl homology (DH) domain superfamilyInterproscan
IPR036872
all species →
Homologous_superfamilyCH domain superfamilyInterproscan
IPR001715
all species →
DomainCalponin homology domainInterproscan
IPR011993
all species →
Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR001331
all species →
Conserved_siteGuanine-nucleotide dissociation stimulator, CDC24, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45818
all species →
PROTEIN VAVInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005085
all species →
Molecular Functionguanyl-nucleotide exchange factor activityInterproscan
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0005737
all species →
Cellular ComponentcytoplasmInterproscan
GO:0016477
all species →
Biological Processcell migrationInterproscan
GO:0043087
all species →
Biological Processregulation of GTPase activityInterproscan
GO:0035556
all species →
Biological Processintracellular signal transductionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K05730VAV; guanine nucleotide exchange factor VAV-Lipid and atherosclerosisko05417deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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