Detailed information of Ppa0G015480 in Paragorgia papillata

Genomic Location: Contig00010:1531167...1545096
NR annotation: XP_028393063.1, negative elongation factor E-like [Dendronephthya gigantea]
Species Paragorgia papillata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q95ZE9Negative elongation factor E OS=Drosophila virilis OX=7244 GN=Nelf-E PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006185 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00076
all species →
RRM_1RNA recognition motifDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR035979
all species →
Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR000504
all species →
DomainRNA recognition motif domainInterproscan
IPR033102
all species →
FamilyNegative elongation factor EInterproscan
IPR012677
all species →
Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR17250
all species →
NEGATIVE ELONGATION FACTOR EInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003676
all species →
Molecular Functionnucleic acid bindingInterproscan
GO:0003723
all species →
Molecular FunctionRNA bindingInterproscan
GO:0006355
all species →
Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0032021
all species →
Cellular ComponentNELF complexInterproscan
GO:0034244
all species →
Biological Processnegative regulation of transcription elongation by RNA polymerase IIInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for Ppa0G015480.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP